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20120215-save-attachment-bsv_xml-fix-ddd_price-interaction-snapback-interaction-key-oddb_org-update-just_medical-decorators-ebps-updated-oddb2tdat-check-grid_c-htmlgrid

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  1. Debug keppra daily cost missing
  2. Fix Snapback link interaction oddb.org
  3. Update oddb2tdat
  4. Move interaction key to oddb.yml file oddb.org
  5. Continue to check grid.c

Commits
  1. Updated bsv_xml.rb to save attached files to doc/sl_errors directory and to log the saving process. And it included swissmedic_no5_oddb number in Unknown_Package file. (oddb.org)
  2. Updated just_medical decorators to search drugs with iksnr (ebps)
  3. Updated ddd_price calculation algorithm in the other case than Tabletten, for example, Package#dose unit becomes mg/ml (concentration) (oddb.org)
  4. Fix ddd_price and ddd_chart for the other galenic form than Tablette(n), for example, Package#dose unit is mg/ml (oddb.org)
  5. Updated snapback string to have substance name and atc-code in interaction_detail view (oddb.org)
  6. RECA becomes always 11, added CMWS with 2 at the end of line, and output file is saved with iso-8859-1. (oddb2tdat)
  7. Removed double quataion mark from output file (oddb2tdat)
  8. Moved interaction key to etc/oddb.yml (oddb.org)
  9. Fix error: undefined method pointer for nil in limitation_analysis view (oddb.org)

Debug daily cost missing

Problem

Check

ch.oddb> registration('57489').package('006').ddd_price.class
-> NilClass

Note

  • The reason is that Package@@ddd_galforms is not matched with Package#galenic_group
  • always Package@@ddd_galforms = /tabletten?/iu
  • the calculation part of ddd_price Package#ddd_price
      if(!@disable_ddd_price && (ddd = self.ddd) \
        && (grp = galenic_group) && grp.match(@@ddd_galforms)\
        && (price = price_public) && (ddose = ddd.dose) && (mdose = dose) \
        && size = comparable_size)
...
        if(mdose > (ddose * factor))
          (price / size.to_f) / factor
        else
          (price / size.to_f) * (ddose.to_f * factor / mdose.want(ddose.unit).to_f) / factor
        end
  • why it does not work in the case of keppra
 Basically, the calculation skips in the other case from tabletten 
 And the other problem is as follows:
 ddd.dose  (ddose): the amount of active_agent required for one day
 self.dose (mdose): (usually) the amount of active_agent included in one unit of package
 but in the case of mg/ml, mdose means not 'amount' but 'concentration'

Commit

Next

Commit

Fix Snapback link interaction oddb.org

Task

  • It should include Wirkstoff and ATC-Code like
 Sie befinden sich in - Interaktionskorb - Interaktionen - Interaktion Detail C07AB02 (Ciclosporinum) und G04BE03 (Sildenafilum)

Commit

Update oddb2tdat

Task

oddb2tdat has to be extended with

  11 (Recordart)

at the beginning of line and

  2 (Mwst-Code)

is added at the end of line.

Commit

How to use

 oddb2tdat oddb.csv oddb.dat
 oddb2tdat oddb.csv oddb.dat transfer.dat

Move interaction key to yml file oddb.org

Commit

Note

  • The interaction key is used to search interactions.
  • The key should be written in etc/oddb.yml as
 interaction_key: 'XXX'
  • If there is no interaction key in etc/oddb.yml, the default key, which is hard-coded, is used but it will be expired after searching some times in a day

Continue to check grid.c

Last time http://dev.ywesee.com/wiki.php/Masa/20120131-fix-errors-oddbOrg-recycled-object-error-migel-check-gridC#CheckGridC

Refer to http://dev.ywesee.com/uploads/$PageName//ch.oddb_crash_13.2.2012_15.47.txt

Segmentaion fault test

  • /usr/local/lib/ruby/gems/1.9.1/gems/htmlgrid-1.0.4/ext/htmlgrid/grid.c (L406)
 VALUE grid_to_html(self, cgi)
 ...
      attrs = rb_hash_new();
      if(cf->attributes != Qnil)
        rb_hsh_update(Qnil, cf->attributes);
        //rb_hsh_update(attrs, cf->attributes);
      if(cf->colspan > 1)

Recompile

 sudo rm grid.o; sudo rm htmlgrid.o; sudo make

Run

 masa@masa ~/ywesee/oddb.org $ bin/oddbd > segfault_log.20120215.txt 2>&1

Access

Result

Note

  • The error log is a little bit different from online crash log http://dev.ywesee.com/uploads/$PageName//ch.oddb_crash_13.2.2012_15.47.txt
  • 'attrs' must be a Hash
  • 'cf->attributes' also must be a Hash
  • HtmlGrid::Componsite has @grid and this will be an instance of Grid class
  • HtmlGrid::Composite becomes a super class of the other HtmlGrid class
  • That means every HtmlGrid instance has @grid (Grid instance)
  • @grid gets data from oddb database in most of view classes
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Page last modified on February 15, 2012, at 05:47 PM