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20131204-integrate-epha-interaction-4

Summary

• integrate a simple interface to display the interaction from EPHA

Commits

• https://github.com/ngiger/oddb.org/commit/40f51c5f9d3047e23dadc0d9fab78f87929aa85b Make all tests for views pass
• https://github.com/ngiger/oddb.org/commit/0d822b8e1dd0af766f33bc5318c2fcfa221a25f1 Added spec/smoketest.rb from vagrant-oddb
• https://github.com/ngiger/oddb.org/commit/d9178c0ac641a0fdafa790297d5c5c7355dbd0b9 Added yasu and niklaus to developers. Documented watir tests
• https://github.com/ngiger/oddb.org/commit/b280858c162acbac36d3a81ca1343d1ac4890a36 Added watir test for existing interactions
• https://github.com/ngiger/oddb.org/commit/29a633211234a9322b773f34598fe86869233790 Fix link to matrix.epha.ch
• https://github.com/ngiger/vagrant-oddb_org/commit/c636adb827089af5fe9ffd081abe72c059b3586a Fixed dojo version to use
• https://github.com/ngiger/vagrant-oddb_org/commit/d9a3eafa0703d01a8987c1bf5001dea21a094d1f Fixed Home URL in smoketest
• https://github.com/ngiger/vagrant-oddb_org/commit/8f684cba46d4b598e627ce7a26032b4f3377fbf0 Add same mount points for vagrant-VM as I have on oddb-ci2

Index

• integrate a simple interface to display the interaction from EPHA

---

integrate a simple interface to display the interaction from EPHA

Continue work. Example is still interaction is between Marcoumar and Aspirin.

Cleaning up of the test for views to have a clear base to test against with commit Make all tests for views pass

As I have to change the Web-Interface of oddb.org I want tests, that check the expected behaviour. Therefore I reactivated the spec/smoke_test.rb from my vagrant-oddb project. The first time I ran rspec spec/smoketest_spec.rb I got the following Failure.

Failures:

  1) ch.oddb.org should trigger the limitation after maximal 5 queries
     Failure/Error: @browser.button(:name, "search").click
     Watir::Exception::UnknownObjectException:
       unable to locate element, using {:name=>"search", :tag_name=>"button"}
     # ./spec/smoketest_spec.rb:88:in `block (3 levels) in <top (required)>'
     # ./spec/smoketest_spec.rb:84:in `each'
     # ./spec/smoketest_spec.rb:84:in `block (2 levels) in <top (required)>'

Finished in 1 minute 16.09 seconds
10 examples, 1 failure

When running it a second time, the error did not show up again. May be the oddbd just took a little to long the first time to respond.

Added the same test (with the new URL oddb-ci.dyndns.org) via commit Added spec/smoketest.rb from vagrant-oddb

I don't intend for the moment to add these test to the travis-CI even when there seems to be a possibility to to it. See gui-and-headless-browser.

Documented watir tests for newcomers. See commit Creating Watir tests using the existing interactions to add the two medicaments Marcoumar and Aspirin to the interactions basket. See commit Added watir test for existing interactions

Zeno explained that:

• The old "Plus" search facility will go away as soon as the new interactions are working
• The old interactions result displayed also the references which could be found in the results fetched from api.epha.ch. They will be added later either because Epha adds them to the CSV export or we grab them when reading the interactions from Epha.
• The steps to search are
  • Enable "Instant" search (this will not be necessary after)
  • Search for a medicament
  • Add it to the interaction basket
  • Do the above two steps for each medicament
  • Click on show interactions
  • Display the results

I decided to first remove the unneeded old stuff (e.g. the links to pub_med, reference). In the state I will replace looking via Epha by consulting the new tables.

After upgrading from dojo 1.3 to 1.7.2. The mouse over worked. Pushed commit to Fix link to matrix.epha.ch

Pushed a few commits for the vagrant environment for the changes made today and last week.