Index>

20150106-evidentia-look-and-feel

Summary

• create eventia look and feel based on "atupri/atupri-web"
• having a look at NixOS
• medreg gem should generate csv files

Commits

• https://github.com/ngiger/oddb.org/commit/5601e87a11ebb681eada505f9b3555c01f2bfac7 Merged lookandfell atupri and atupri-web to evidentia
• https://github.com/ngiger/oddb.org/commit/02890cbaab99e7c3a90504c231d6724cde889841 Added google_analytics_token for Evidentia
• https://github.com/ngiger/medreg/commit/97173ba34f233dd078105e0fed5d8036b7ed6e42 Write csv files, too
• https://github.com/ngiger/medreg/commit/51e4d55523ff9c4d747bb68d169925ceeb049538 Bumped version to 0.2.0
• https://github.com/ngiger/medreg/commit/55221990c1be44fc0024e6182529c9e8cc61875f Fixed path for log and data
• https://github.com/ngiger/medreg/commit/26b5c7494a0ca3ee235ce0eaa788872471971dd7 Create csv files for companies, too
• https://github.com/ngiger/medreg/commit/0ff2c08366ca39bcbf1a6983220673dcce3e838f Fix warnings
• https://github.com/ngiger/medreg/commit/664b9b20f3ee80f0674eb00c7f8846ecf376ebef Skip almost empty address lines

Index

• create eventia look and feel based on "atupri/atupri-web"
• having a look at NixOS
• medreg gem should generate csv files
• medreg skip (almost) empty lines

Keep in Mind for work to do in 2015

• Fix dojo error http://www.sitepen.com/blog/2012/10/31/debugging-dojo-common-error-messages/#forgot-dom-ready
• I removed on May-27 tests for ix_registrationss, fix_sequences, fix_compositions, fix_packages from test/test_plugin/swissmedic.rb,as he could not find any references for them in the src code. Did I erroneously remove stuff when cleaning up the swissmedic import earlier?
• The whole test for older/newer Packages must be adapted to xlsx. One must compare the rows (e.g. by creating csv files) and do the same stuff in xlsx!
• search for registration holder like mepha should work. bin/admin works for search_companies('Mepha')
• info registration holder like mepha should should include fields like ydim-i. Mepha (No) and Novartis Ophthalmics AG (Yes, but fields are empty)
• creat gem: task: input=file with ean-codes, standard output show ean-codes + atc-code. Source is Swissmedic Packungen.xlsx or XML.
• Display 10 recalls not only those from this month
• Import via data/medreg_companies.yaml

---

medreg skip (almost) empty lines

medreg gem should skip adress lines consisting of a single '.'. e.g. medregom displays for 7601000264015 and address. Fixed this problem with commit Skip almost empty address lines

medreg gem should generate csv files

When having several addresses, we should generate several lines with the same GTIN.

Just found out that they made changes on the medregom page to make our search impossible, eg. shortcuts like http://www.medregom.admin.ch/de/Suche/Detail/?gln=7601000186874&vorname=Luca&name=a+Marca do not work anymore. But it does not seem to affect our results.

Pushed commits:

• Write csv files, too
• Bumped version to 0.2.0
• Fixed path for log and data

Must now generate CSV files for the companies, too.

Pushed commits:

• Create csv files for companies, too
• https://github.com/ngiger/medreg/commit/0ff2c08366ca39bcbf1a6983220673dcce3e838f1Fix warnings

Started medreg import.

create eventia look and feel based on "atupri/atupri-web"

Must add an method for getting the google-analytics token to LookandfeelBase. Added test. Corrected URL of evidentia. Things look now better, but the google_analytics is not active when looking at http://evidentia.oddb-ci2.dyndns.org/. Fixed this problem. Waiting for the external css.

Pushed commits:

• Merged lookandfell atupri and atupri-web to evidentia
• Added google_analytics_token for Evidentia

The relevant part of the apache config looks like this

 <VirtualHost *:80>        
  DocumentRoot /var/www/oddb.org/doc
  ServerName evidentia.oddb-ci2.dyndns.org                      
  DirectoryIndex index.rbx                                        
  RubyAddPath /var/www/oddb.org/src
  RubyRequire 'sbsm/trans_handler'
  SetHandler ruby-object                              
  RubyTransHandler SBSM::FlavoredTransHandler.instance
  ErrorLog "|/usr/sbin/cronolog -l /var/www/oddb.org/log/evidentia/error_log /var/www/oddb.org/log/evidentia/%Y/%m/%d/error_log"
  CustomLog "|/usr/sbin/cronolog -l /var/www/oddb.org/log/evidentia/access_log /var/www/oddb.org/log/evidentia/%Y/%m/%d/access_log" combined
  SetEnv DEFAULT_FLAVOR evidentia
  AddDefaultCharset UTF-8                     

  Alias /robots.txt /var/www/oddb.org/doc/robots.txt

  RewriteEngine On               
  RewriteRule ^/(..)/?$ /$1/ [PT]
  RewriteRule ^/(..)/(evidentia)(.*) /$1/evidentia$3 [PT]
  RewriteRule ^/(..)/([^/]*)/?(.*) http://$2.oddb.org/$1/$2/$3 [R,L]
</VirtualHost>  

-- having a look at NixOS

http://lwn.net had a pointer to an intersting blog about NixOS. I read it, saw that NixOS and ruby are not the best friends, as ruby has its own dependency hell, which cannot be solved easily with Nixos.

• https://www.domenkozar.com/2014/03/11/why-puppet-chef-ansible-arent-good-enough-and-we-can-do-better/
• https://www.domenkozar.com/2014/01/02/getting-started-with-nix-package-manager/
• http://www.ruby-doc.org/gems/docs/v/vagrant-nixos-0.0.6/README_md.html
• http://blog.lastlog.de/posts/advanced_webservices_on_nixos/
• https://nixos.org/wiki/Talk:Ruby
• https://nixos.org/wiki/Nixpkgs-ruby-overlay
• http://nixos.org/nixpkgs/manual/ # howto add new packages

Tried to get the spreadsheet gem working. Tried

nix-env -i ruby-bundler
git clone https://github.com/zdavatz/spreadsheet.git
cd spreadsheet
bundle install
bundle exec rake install_gem # fails with
<..>
cd pkg/spreadsheet-1.0.0
rake aborted!
"[![Build Status](https://secure.travis-ci.org/zdavatz/spreadsheet.png)](http://travis-ci.org/zdavatz/spreadsheet)" is not a URI
/nix/store/nyv367y4dksxwz6w91pd56bpaw2vrqr1-rubygems-1.8.25/lib/rubygems/specification.rb:2099:in `validate'
/nix/store/nyv367y4dksxwz6w91pd56bpaw2vrqr1-rubygems-1.8.25/lib/rubygems/builder.rb:37:in `build'
/nix/store/nyv367y4dksxwz6w91pd56bpaw2vrqr1-rubygems-1.8.25/lib/rubygems/package_task.rb:116:in `block (3 levels) in define'
/nix/store/nyv367y4dksxwz6w91pd56bpaw2vrqr1-rubygems-1.8.25/lib/rubygems/package_task.rb:115:in `block (2 levels) in define'
/nix/store/nyv367y4dksxwz6w91pd56bpaw2vrqr1-rubygems-1.8.25/lib/rubygems/package_task.rb:114:in `block in define'
Tasks: TOP => install_gem => package => gem => pkg/spreadsheet-1.0.0.gem
(See full trace by running task with --trace)

Wondering why sometime package names have different names than usual. nix-env -i eclipse-sdk-4.4 works, but add eclipse-sdk-4.4 to /etc/nixos/configuration.nix fails.